Generate a plot using the output from combined_methods

Generate a plot using the output from combined_methods

Usage

core_plots(
  combined_otu_data,
  low = "#EAE6f3",
  high = "#432976",
  legend_title = "Taxa Count"
)

# S3 method for default
core_plots(
  combined_otu_data,
  low = "#EAE6f3",
  high = "#432976",
  legend_title = "Taxa Count"
)

# S3 method for core_methods
core_plots(
  combined_otu_data,
  low = "#EAE6f3",
  high = "#432976",
  legend_title = "Taxa Count"
)

Arguments

combined_otu_data

the dataframe output of combined_methods

low

the hexidecimal code of the low color

high

the hexidecimal code of the high color

legend_title

title display above legend

Value

a ggplot2 object of methods...

a dataframe with all observed taxa, their inclusion to the core by method (delineated as a 1 or 0), the mean, variance, and coefficient of variation.

Examples

if (FALSE) {
core_arabidopsis <- combine_methods(arabidopsis)
core_plots(
  core_arabidopsis,
   high = "#2D5062",
   low = "#E6ECF1",
   legend_title = "Arabidopsis Taxa Count"
)
}